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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|158288575, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PFAVILQCSV QTVTAIQTEK EAYFNGSAYL RLKTPMTLWS YSAISFKSCR GGEILSQRYS  60
   61 GHALLVSVLP DWVSIVLSTP AQQPIEARVT GRLLDNRWHT LELIYQAGTL YCVIDKQSTP 120
  121 IANQSYNAQL IHDQEIKNEA AVLILGKQYS GCLLHGPGLV FNSSAMNAEA VVFGPCPLAA 180
  181 GPCSDHDVLE GVPVDYCSHD PCMQHGTCIS RSDSYECHCT ARFKGKNCEI DMGPPCLSYP 240
  241 CQHGGTCLED SKGEYRCTCA PGYTGAVCDT ELSVHPLCEK NPCANNGTCR VAPGTNTVEC 300
  301 ECLKGFIGMR CEVNWDDCKP NVCLNGGRCI DGVDAFTCDC KGTGYGGTLC QNNIDECLAN 360
  361 PCQNGGTCFD TYGSFLCDCP SGFTGPKCQM SVNECKSQPC QNGGTCIDTR EGFECRCIPG 420
  421 YNGALCELEP GCGQCPPDSE CIAGRCVCKP GTTGTRCESP IALPYSDECN CLNGGSCTPN 480
  481 GSACLCPPGY DGARCEQPVG NGLCSPANCA EPYRCIGGKC QCPDNMNCDN PCASSPCLHN 540
  541 GSCYLQGQGY ACKCTSGFEG KRCENDIDEC KKDGICGNGI CQNTPGSFRC FCTPGYTGLN 600
  601 CDLDVDECLS HPCKNNAECQ NKQNDYECIC PAGYTGKDCS VDIDECESNP CSKGSSCVDQ 660
  661 VANFTCMCVP GMTGRLCEID IDDCESQPCQ NGGRCIDQLG GFQCDCNATG YSGIYCQTNI 720
  721 NECESNPCTN GAECVDKIND YQCNCFPGYT GKNCEEDIDE CESVPCLYGG TCLQRSNYSL 780
  781 YQPPALAGAK GLPVHFAQPF SYAIAAGYEC ICVPGTMGTN CETNINECES NPCKNGACVD 840
  841 GVGNYTCECD PGFEGSHCET DIDECLKYRP CVHGTCMDGR NNYICDCDGL WGGKNCSVQL 900
  901 TGCVNEPCLN GGTCVPYLEN ETQHKFNCSC HQGFQGKTCD TVTTMSLVAS SLLVVNTTRD 960
  961 EGYDIQLRFK TTLPNGILAF GNGATSYILV LNNGRLNLHS ALLNRWDGVF IGSELNNSKW1020
 1021 QKVFVAINSS HLVLSANDEQ TIYPINSYEG TNGSNTSFPI TYLGGTIPSL AQPYLKHIAR1080
 1081 AVSSFVGCME DVVINGQWVL PGQEQEFTTL HNIDTGCPRT PQCEPNPCHS NGHCTDLWHT1140
 1141 FSCSCQRPHL GHTCKYNITA ATFGHENTTN SAVKVTVSDV ARRAIRSVLD ISMFIRTRKP1200
 1201 SGQVFYLGSD PDNQNANANQ SPSDDSYVAA FLSKGELLVR MIFNDTPEGY TVGGNKLDNG1260
 1261 YLHLIEVIRN STLIQVKLNG TEYFRKTLST SGQLNAQVLY LGGPPPNADT INSLYKDDSE1320
 1321 KQYFKGIIQD VQVSNGSHAM IVELYPLGNE TEGLELPAPF GQVTIDRTSV LEGIVSDDLC1380
 1381 RSQPCYHDAY CENTWNDFIC TCPRGYKGKY CQDIQFCELQ KCPMNATCQN LDAGYECISN1440
 1441 MTFHDDKEPL VFSFNDKDRK DISMDTIEIS YRTKFGGTLL YVHDGDMYFE ISTIRQLVTI1500
 1501 SWLLSGDLPE THRFERELAG EDDSYDWHTL LVKVSQGGKL EAGWKGWETA IDPQPSLTAD1560
 1561 IDYFAFRHLF SGRQQIYLGG MPEMAHIENN SVVSGGIDKG SSFKGCLGET RVGGFLLPYF1620
 1621 PHELIYPDTF NLTEGHFTLN SSQPEQGCIL CFQQSCKNGG VCSNPSEQYA CECPAGYESD1680
 1681 DCSQNIDECL AANCANGATC VDGVASFACQ CVEGYEGQLC EIEINECDSN PCHNGGVCQD1740
 1741 LLAGFTCTCT EEYAGPQCDV FRLVTCENLP CRNGSRCLDG YNMTTGNNFT CTCSAGYAGP1800
 1801 LCDVPFCRLE PCQNGGMCDT EAMIPVCNCL PGYVGMFCET ELNECESAPC LNGGQCIDFI1860
 1861 NEYRCNCTGT GFDGKNCEHD INECLQERIS CGGRGHCINT EGSFRCHCEE GMCGKDCAQS1920
 1921 DPCQVNPNVC LNGGICVEDC DRERRYYCNC TGGYTGVNCS EQATLEAEEA SGADIALIVV1980
 1981 PVVIGILTIA GALIGTFLVM ARNKRATRGT YSPSAQEYCN PRLEMDNVLK PPPEERLI

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