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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|58377582, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QYRSPRIIEN PSDTIVPKND PVTLNCKAEG KPQPVIQWYK DGEEVKLDAN HVLLPAGSLF  60
   61 FLRTVHSKKE QDDGVYWCVA SNQAGKVYSR NATLQVATLR DDFRVEPKNT RVAAGETALL 120
  121 ECSPPRGNPE PNVSWKKNDG FLELDDYRPS KELARIRIVD SGNLLISDVR PTDEGRYQCI 180
  181 AQNMVGSRES GLAKLTVQVK PYFVAEPDDA TVLEGHRVQF QCAVGGDPAP QILWTKQHGD 240
  241 IPVGRAEISE EDRSLIIRNV TADDHGQYIC EARNSVGVIS ARASLTVNTP PVFIVRPQDQ 300
  301 KVTVNGVVTF KCSAGGSPLP SVFWTREGSQ TLMFPNNSYG NMHVSGQGSL QIRGVQREDD 360
  361 GYFVCSALSV AGSVTSRVYL QVTSPIDSIP PPLLQQVPSN QSLPSGTKAT LPCRSSAPRW 420
  421 QRDGINLLTG PGKRFKILSG GSLRIDDLQT EDSGWYRCIV KLDDHEYSWS AYLSVDSNLP 480
  481 PQSQQIFNAE LLPSAPGQPK AANITNTNVT LIWARGQDKL RTNAIASYTI EYHSTDDREM 540
  541 DAGWKIALRQ IAGNTATVTG LSPETGYIFS VRAENGMGFS APSPVSTLIR TLSSDDRVTI 600
  601 PEEMDTARMV LSGKILELID IIALTSSSVR LEWQLQIGGS EEYIEGFYVR YRDLDSDVQR 660
  661 YSMLPIPNSE TESHIITNLN KYTRYEFFLT PYFKNLEGQP SNARIVRTLE DMPTGPPTNI 720
  721 QAGMLNLTAG WVRWSPPLRE HQHGAVVGYK IQVKSGNNAS KLLAQMTLNS TTTSVMLNNL 780
  781 TTGASYTIRV AMFNRLGMGP FSKPLYLVMD PSFVIVPQGV HNNHNQLYGD YDDRRHPQHQ 840
  841 PHAHNFLHET WFMLLVVFSL VVVLVVTIAG GVVVFRRRQG LGKPVVTVPT LGGRRGDIAN 900
  901 LSMSRKDGGI WIDRGWRTCD TDKDSGLSSI KLLEGSQTHH TYPLADGGTD YAEVDPRGLT 960
  961 SFYNRKSPES PTPYATTMII NGIPRSDNGD LGYQGHDTFS STSSSFRSFY GYPRPINPNN1020
 1021 GKSQRTPRFF FPPNWVDYLP PPPEHPPP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle