YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|15223823, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPTTTTSSAS SSSSASGNNR QSDVFSRLAS SDPEVKLKAL REVKNQIIGN RTKKLSFLKL  60
   61 GAIPAIASVL ADADDSDECN NILVQSAAAL GSFACGFEAG VQAVLDAGVF PHLLRLLTNT 120
  121 DEKVVDAGAR SLRMIFQSNQ APKYDFLQEK NMEFLFSLLN SENENVSGLG ASIIAHACGT 180
  181 SVEQRVLCEA GVLEKLVILL DGSLSQREAC LESLATVLKN NPEAVSDFVG LESGKYFNSV 240
  241 TELTKDRYPR TRLLSCLCLV VIYNTSPSYF INMGTKSSLI TTLLELLNDP GQSGDDAALG 300
  301 LSCLIAEKED LQQLAYEADA IKNIVEILKT GSELQSKRLQ GLFLSLAELC SKLEDCRCSF 360
  361 LSLQVLDLLT DALRHKDADV RAAACICFRN AARSVKSLSA GRFNSDHVML PLVQLLHDPS 420
  421 SSVQVAVLGA LNNIVMDFSS PKSSFIEYGG IKQLTELSKS MDPNTRCSAL RALRNLMFLA 480
  481 DIKRKELFYS DVKAQGLACL ISDPEPPVQE QALALLRNLV DGCISSIEFV FDEDGLILDT 540
  541 VGRQLRKAPQ AQMAIQGMYV LTNVASGTEL HKEAVMEQLF PQAKAGSENF MLKFLQSDES 600
  601 QLRSAAVWTI INLISPSSPG AFDRHVKLRN AGIIPQLKNM VNDACLDVKI RIRTVLGQSM 660
  661 SFGDNY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle