YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|58381126, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLCKCPKRQ VTTQFCFEHR VNVCENCMVV NHTKCTVQSY IQWLKDSDFD SNCTLCGSPR  60
   61 ESDDCVRLIC YHVFHWKCLN ARQQLLPANT APGGHTCPIC SEPMFPPSNL VSPVADVLRV 120
  121 RLGQVNWGRN ELGLPLVSSS SAGELMVGQN GAGTMTGYSD GLAGGRAIGG NGGNLASSKE 180
  181 RPETPHSVLN LDPYVNIANS RRTTLLAREP PIGGSDRDDN KYKRRTPKEI FSRWSRRLYA 240
  241 PSARPVWRKT WFLVGTGLLG FVCIVYVMAT ISRGDDQGDR ELGGFVPNRN LPHAE

Type	Start	End	Confidence
Cytoplasmic	1	249	0.82
Transmembrane Helix	250	270	0.92
Non-Cytoplasmic	271	295	0.83