YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|55243515, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GVRICCCRVL TCVNLDFFVS KNGILKCFEL VLGWFCQTML VQFGMDSAKD IGEAFWGFLT  60
   61 TCSAFLLTTT ILLLCYTISA RTFHLVRQSI FEVVYNGLAC VMYLSASSYL GFAVNVFLYP 120
  121 KFLMFKTTGG IHSAYPAMTA VYYMGGIVGL VYGVDTFVAY RHLKGFA

Type	Start	End	Confidence
Cytoplasmic	1	23	0.81
Transmembrane Helix	24	45	0.69
Non-Cytoplasmic	46	54	0.82
Transmembrane Helix	55	78	0.90
Cytoplasmic	79	92	0.84
Transmembrane Helix	93	114	0.88
Non-Cytoplasmic	115	138	0.76
Transmembrane Helix	139	159	0.89
Cytoplasmic	160	167	0.85