YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|58380631, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DTMQSKGEIA KIVGAVLLPQ LGGFVNGKLT RTQITEWYNH LNFPWFKPPN WLFAPVWTAL  60
   61 YSGMGYASYL VWKTGGGFGG PAQLPLALYG TQLALNWAWT PIFFGLHQLK WSVVEILALT 120
  121 GSVAATGVAF YRINPLAGYL FVPYFAWCAF ASALNYQIYS LNTSPASTAT IEEVTDDAKS 180
  181 K

Type	Start	End	Confidence
Cytoplasmic	1	50	0.61
Transmembrane Helix	51	72	0.88
Non-Cytoplasmic	73	81	0.52
Transmembrane Helix	82	104	0.72
Cytoplasmic	105	110	0.42
Transmembrane Helix	111	133	0.83
Non-Cytoplasmic	134	138	0.42
Transmembrane Helix	139	159	0.85
Cytoplasmic	160	181	0.52