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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|30725328, gi|...
Protein type: Transmembrane
Type Confidence: 0.53
Topology Confidence: 0.48
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGEIQERLSV SSSSSSSSSS LSLSTALPKG DSLPIDADSW MIAEERAHEI LCTIQPALVS  60
   61 DRSRNEIIDY VRTLIMSHEG IEVFSFGSVP LKTYLPDGDI DLTVLTKQNM DDDFYGQLCS 120
  121 RLQNEERESE FHATDVQFIP AQVKVIKCNI RNIAVDISFN QTAGLCALCF LEQVDQLFGR 180
  181 DHLFKRSIIL VKAWCYYESR ILGANTGLIS TYALAVLVLY IINLFHSSLS GPLAVLYKFL 240
  241 DYYGSFDWNN YCISVNGPVP ISSLPELTAA SPENGHELLL DEKFLRNCVE LYSAPTKAVD 300
  301 SNGLEFPIKH LNIVDPLKYS NNLGKSVTQG NVQRIRHAFT LGARKLRDVL SLPGDTMGWR 360
  361 LEKFFRNSLE RNGKGQRQDV NDPVTAFGTG RSELSELSGD FDSSFGRLVY GQMYHGHSLP 420
  421 GTFQHGYIPV SSHLSGWDIV RHLVTYRKNE FHLRSLNVST SMQPFPLHSL PNGCQNMRKT 480
  481 RGTGTYIPDM SQQVYSDRFR ESGTGTSSTN HLEASSEAID NDGASSCCNL SGEVSTSCTS 540
  541 NKGEECVRPE SVLKSQRSAN LELDDNCQFP PPENLVEPRT SSTLVLENGK EESIRSSQTM 600
  601 NGS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle