YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|55240862, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.84
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQLLSGLVKT TVPNYLSGLP IPDTFGGWFR LGFKDWLSLV PPTAAVAGVV YMSYLAFCPE  60
   61 ARPKPSQKAN NKIRLEEAKV VDMIDIEDIA EKAAFCRCWK SNNWPYCDGS HGAHNKECGD 120
  121 NLGPVVVQR

Type	Start	End	Confidence
Non-Cytoplasmic	1	36	0.59
Transmembrane Helix	37	58	0.77
Cytoplasmic	59	129	0.61