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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|55240520, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSMISVRLAA SVARSLPRTA TQVAKIAVPA VSVAARNFHV STAHRGAEIS AILEERILGA  60
   61 APKADLEETG RVLSIGDGIA RVYGLKNIQA DEMVEFSSGL KGMALNLEPD NVGVVVFGND 120
  121 KLIKEGDIVK RTGAIVDVPV GDEILGRVVD ALGNAIDGKG EIKTKQRFRV GIKAPGIIPR 180
  181 VSVREPMQTG IKAVDSLVPI GRGQRELIIG DRQTGKTALA IDTIINQKRF NDGQDESKKL 240
  241 YCIYVAIGQK RSTVAQIVKR LTDSGAMNYT IIVSATASDA APLQYLAPYS GCAMGEYFRD 300
  301 NGKHALIIYD DLSKQAVAYR QMSLLLRRPP GREAYPGDVF YLHSRLLERA AKMSPTLGGG 360
  361 SLTALPVIET QAGDVSAYIP TNVISITDGQ IFLETELFYK GIRPAINVGL SVSRVGSAAQ 420
  421 TKAMKQVAGS MKLELAQYRE VAAFAQFGSD LDAATQQLLN RGVRLTELLK QGQYVPMAIE 480
  481 EQVAVIYCGV RGYLDKMDPS KITKFEREFL AHVKTNEKAL LQQIASEGKI SDDADAKLKS 540
  541 VVTSFMSTFS A

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle