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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|37785695
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALIRRRKGS EPEKGQSENS EPKIQKKEDE DDDNDKNKKN KKKNKDEVGV FKKSTRWSCV  60
   61 DSCCWFVGCI CTLWWFLLFM YNVMPASFPQ YVTEAITGPM PDPPGLKLKK EGLSVKHPVV 120
  121 FVPGIVTGGL ELWEGHQCAE GLFRKRLWGG TFGEVYKRPS CWVEHMSLDN ETGMDPPGIT 180
  181 VRPVSGLVAA DYFAAGYFVW ADLIANLARI GYEEKTMYMA AYDWRISFQN TEVRDQTLSR 240
  241 IKSNIELMVS TNGGNKAVII PHSMGVLYFL HFMKWVEAPA PMGGGGGPDW CSKYIKAIVN 300
  301 IGGPFLGVPK AIAGLFSAEA RDIAVARAIA PGFLDNDMFR IQTLQHVMKM TRTWDSTMSM 360
  361 IPKGGDTIWG DLDWSPEESC GLHTRKQSSN NTQLTEQKTN KTNVNYGRMI SFGKAVAEAD 420
  421 SSKIDIVDFR GAIKGPNVAN TSCRDVWTEY HDMGVEGVRA VAAVAEHKVY TAGSIIDLLQ 480
  481 FVAPKMMARG SDHFSYGVAD NLDDPKYEHY KYWSNPLETK LPNAPDMEIF SLYGVGLPTE 540
  541 RAYIYKLTPF AECYIPFEID PNAEGGDKVS CLKDGVYTVD GDETVPVLSS GYMCAKGWRG 600
  601 KTRFNPSGIR TYVREYDHSP PANLLEGRGT QSGAHVDIMG NFALIEDVMR VAAGAKGEEL 660
  661 GGDKVYSDIF KWSDRIKLPL 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle