YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|58386165, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTKVAAKKF KWALDFNTNS GSDIAAPPGY NPSADVISSK VVNQTDQSHL ILKKSWEIAL  60
   61 GPIKQFPMNL VIMYMSGNSI SIFPIMMVVM MFIRPVKMML STHSTFKVIE GISATGQKLV 120
  121 FLLGNLVNIG LALYKCHSMG LLPTHASDWL AFVEPQRRLE YSGGGISLL

Type	Start	End	Confidence
Cytoplasmic	1	69	0.59
Transmembrane Helix	70	93	0.89
Non-Cytoplasmic	94	113	0.55
Transmembrane Helix	114	134	0.51
Cytoplasmic	135	169	0.63