YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|58386588, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ASKMVDNTKD LGFTKEEELL LQDFSRNVST KSNVLFYGSA FIVSAVPIWL FWRVHQMDLL  60
   61 PSVVFFVIVT GLCTYLLAMA YRNTKFTMKH KIAIKREDAV SREMTAQLAD DKKMSRKERD 120
  121 ERVLWKKIDV AEYEATTFSI FYNNALFLAV VIFASFYLLR SFTPTFNYIF SMVGAGGLLA 180
  181 LLSTGKST

Type	Start	End	Confidence
Cytoplasmic	1	33	0.97
Transmembrane Helix	34	52	0.97
Non-Cytoplasmic	53	58	0.84
Transmembrane Helix	59	81	0.90
Cytoplasmic	82	139	0.94
Transmembrane Helix	140	159	0.92
Non-Cytoplasmic	160	165	0.79
Transmembrane Helix	166	185	0.92
Cytoplasmic	186	188	0.87