YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|58386410, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SAVQIVFETR INQPHSSVLY FNVKCSVFKR SYCLNDTVKV YFVVLAIKQI QHQIATMQSR  60
   61 SVYFIACSLV VVLLSFGVQK GLAIKCWECR SDSDPKCADP FDNSTLSITD CKQVERKEHL 120
  121 PEAQATMCRK IRQKVNGEWR YFRSCAFMGE PGIEGDERFC LMRSGTYNIF MEYCTCNSKD 180
  181 GCNAGSLHGP AGLLLLGASL LALILSKVRL FRLV

Type	Start	End	Confidence
Cytoplasmic	1	60	0.78
Transmembrane Helix	61	78	0.80
Non-Cytoplasmic	79	186	0.85
Transmembrane Helix	187	211	0.75
Cytoplasmic	212	214	0.81