YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|58388104, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LVTVAKWLKT DRTSCSTSVQ RYIRKKNSYF KMKMLLGAIA LTLVISAFAA PLDDSRNAEI  60
   61 LRYSSENIGI DGYRFEFATS DGTSRTEEAE LRNPGTDNEA IAVRGSYSYT GPDGTVYVIN 120
  121 YVADENGFQP EGAHIPK

Type	Start	End	Confidence
Cytoplasmic	1	29	0.96
Transmembrane Helix	30	52	0.87
Non-Cytoplasmic	53	137	0.99