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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|55238649, gi|...
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGDTQAKKR KDKKRKKAGA AQAAKEPGDV QMHIQSDHGT GGHWCAKVVF FILLAGLGAL  60
   61 IGLIIMENQG VSNEDTPLSE SRYSEFFNGW VDENRQDDHH HDEVLAAINS LDDHDDEEEE 120
  121 DHDDEEDGTE VQDDDEDEGP ASKLDDDEDD DDENEEDNNK NVDSEEGPTE QQEDVIEGNG 180
  181 ECVLAISTNE KHFTDCCFLL LLVVVIIFDD NDDAERYSGD DYEYELDELE EAEEEAEPEE 240
  241 DAEEQLLIKQ EQEIGAFVPI TFEDFSSMYR APAETEAVPL QSHQEAALPV QPPPPTNERH 300
  301 SSKKTAKDSL LARSKPPKGA FNKLIYGLHK DPIVIPPDGT EQPPTGAAPV ERGENVSAKA 360
  361 LAAFDRILLR TPNSIDALIG RARSLDALAE QRRSNAILTE AIAAYRKVIG HELSVDDGTL 420
  421 KTVAERCIDR MRFQGQHAQA IEVHNVLIRR FDNEPLYRNQ LAVSYLYLNR LAEAKAVLHE 480
  481 TLLRWIDNGF ALVHYGFVLK TLDQNMELAA QYLQEGIETG HPGTQDGRFY FQLGDALQRL 540
  541 GRNSEALAVY RKGVQKKLFR SVYQRSLYNV DGLAARPYWT EEQTTYATEL ELIRAKWREI 600
  601 RDEGLKLLTS AGVFVNESEN LRDRGDWKQL ELFSRGARVE RNCARAPYTC RLVEQYFPAA 660
  661 RTCKRGQVKF SVMHPGTHVW PHCGPTNCRV RAHLGLRVPP GTYIRVAEET RSWENGKWLI 720
  721 FDDSFEHEVW HNGTETRLVL IVDFWHPELT ESQRRTLSPI 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle