YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|58389340, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNLTEVLYK FYDEYAHKTP KKLKIVDAYL LYILLTGITQ FVYCCLVGTF PFNSFLAGFI  60
   61 STVSCFVLGV CLRLQSNPQN KEQFLGISPE RGFADFVFAH IILHLVVVNF IG

Type	Start	End	Confidence
Cytoplasmic	1	27	0.96
Transmembrane Helix	28	50	0.89
Non-Cytoplasmic	51	54	0.78
Transmembrane Helix	55	74	0.92
Cytoplasmic	75	91	0.87
Transmembrane Helix	92	111	0.77
Non-Cytoplasmic	112	112	0.84