YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|55236212, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.47
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRHCIGCWIL LAIYASLPGD IEAATFTVTS QVYMDVSIDG EKIGRITIGM FGEEAPKTVA  60
   61 NFRQLCTKDV DGFSYKGSRF HRVIQKFMIQ GGDVVSGDGH GAISMYGKYF DDENLKINHT 120
  121 CSGFIAMANR GPNTNGCQFY ITTLPAPWLD GKHTIFGKVL DGQAVVHKVE QVRTDTDDYP 180
  181 VKPVIIEDCG DLPILGPFTV SDDPYDLWAW IKAAYLPLGM SFSILAFFQY IIRKLDGFTS 240
  241 REAARNEQLA KTE

Type	Start	End	Confidence
Signal Peptide	1	23	0.91
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	253	0.89