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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|55234248, gi|...
Protein type: Transmembrane
Type Confidence: 0.57
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QTVPTCTPAP SVPRIPQIPA TLPWRQWLKA LPFSFELPLI NFSSAGSVDP TLETVVPRSS  60
   61 VICEANSTLT LVLSLSPTRV QFSCVPCPLN QRKAHFPVFL PHRVKMRLLS AFGLVLAFAT 120
  121 VALAAEEVKT EDGVLVLTKD NFDSVIANNE FVLVEFYAPW CGHCKALAPE YAKAAKVLAD 180
  181 KESNIKLAKV DATVEPELAE KYGIRGYPTL KFFRSGSQVD YTGGREQDTI VSWLEKKTGP 240
  241 AAKELETVEA AEEFLKENNV AVVGFFKDRD SKEAKAFMST AVAVDDYPFG VTSSEEVYAK 300
  301 YEAKCGSVIL FKHFDEGKAV FEGEATEEAL KKFVTAQALP LIVDFSHETA QKIFGGEIKS 360
  361 HLLFFISKEA GHLKEFVEPA KEVAKKFREQ ILFVTIDADQ EDHTRILEFF GMKKDEVPSL 420
  421 RIIRLEEDMA KYKPETNDLS ADKILEFVQS FLDGKVKQHL LSQDLPEDWD KEPVKVLVAT 480
  481 KFDEVAFDKT KDVLVEFYAP WCGHCKQLVP IYDKLGEKYK DSDSVVIAKI DATANELEHT 540
  541 KISSFPTIYL YRKGDNEKVE FKGERTLEGF VKFLEGEKDE QPEEEEKDDK PTKDEL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle