YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57906326, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SVESWIELSS NTNTGATSGL VGAGTTAAVV GGGSSNNFVP TGTTMLAGAV GTKSPDRTTP  60
   61 LAFASVEEYI RLLREAQRDE SKESSRVASL TSTRKNSPRG SPKSPPNSPN TELAATEEDL 120
  121 RNVYINYVNK DGDIVKDTDW VWDWSSRPDQ QPPKDWKFEH PNQTQEERNK PIHAGYSIRQ 180
  181 VRVGKNSLFS REFLYSIVLT NVLSLLLGAG IGAWLQKRGL LLTRVSIE

Type	Start	End	Confidence
Non-Cytoplasmic	1	192	0.55
Transmembrane Helix	193	215	0.90
Cytoplasmic	216	228	0.52