YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|55233756, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSITEKDLYR DTPVRYLGYA NEIGEAFRPV IKKIFVHASY AVAISYVLAD TADKSKKQYD  60
   61 KPEILGGGFR GAAVASGDTL LWQMFASVII PGFTINRICW LSKAALKANK VKGPVGKWGP 120
  121 TLLGLLAIPF IIHPIDSAVD YAMDNTYRKY VK

Type	Start	End	Confidence
Non-Cytoplasmic	1	78	0.65
Transmembrane Helix	79	100	0.78
Cytoplasmic	101	114	0.82
Transmembrane Helix	115	135	0.78
Non-Cytoplasmic	136	152	0.85