YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|58394998, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FHGGYDETIL FEQWKIDSLS GLLWSMLLIF VMAALYEGLK YYREHLFWRT YNALQYRPVT  60
   61 VTEKSNGNGV TPAAQRPTTG PAVPAWATVS MEPAAPARPL RRAPELCRDS IPLKNSRKHS 120
  121 ARFLSSILTF YLFYSRPTML SLMHLFQTLL HILQVTLSFL LMLIFMTYNT WLCLAVVLGA 180
  181 ALGYFLF

Type	Start	End	Confidence
Non-Cytoplasmic	1	19	0.86
Transmembrane Helix	20	39	0.94
Cytoplasmic	40	122	0.91
Transmembrane Helix	123	146	0.71
Non-Cytoplasmic	147	158	0.60
Transmembrane Helix	159	186	0.80
Cytoplasmic	187	187	0.83