YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|21483266
Protein type:	Globular with Signal Peptide
Type Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RVSMFAIAFA VVLCLLVSVD AKFPEDPKPC KYGDGECIMK LCNTLFSENS AEGDPGLNLM  60
   61 QLDPLKVDRM VISQGESSSP VGITLTFTDN LLYGIKDQRI VKVKGFGRDL TAKHEVKIVT 120
  121 KTFSLVGPYN IQGKVLILPI SGTGQSNMTM VNVRAIVSFS GKPLVKNGET YLDVTDLKIT 180
  181 MKPESSHYHF SNLFNGDKAL GDNMNVFLNE NSEAIYKETA KAIDRSFGKL YLGVVKGVFS 240
  241 KLPYAKFFAD ES

Type	Start	End	Confidence
Signal Peptide	1	21	0.58
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	252	0.98