YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PAE8_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFKLKQWLIY LVCSLVIMNT EGLFVNITFV RNAVAKGAVC LDGSPPAYHL DRGSGTGINS  60
   61 WLIQLEGGGW CNNVTNCVSR MHTRLGSSKK MVENLAFSAI LSNKKQYNPD FYNWNRVKVR 120
  121 YCDGASFTGD VEAVNPATNL HFRGARVWLA VMQELLAKGM INAENAVLSG CSAGGLASLM 180
  181 HCDSFRALLP MGTKVKCLSD AGFFLNTRDV SGVQYIKTYF EDVVTLHGSA KNLPRSCTSR 240
  241 LTPAMCFFPQ YVARQIRTPL FILNAAYDSW QIKNILAPRA ADPYGKWQSC QLDIKNCHPS 300
  301 QIKVMQDFRL EFLSAVIGLG RSSSRGMFID SCYTHCQTET QTSWFWQDSP ILNRTTIAKA 360
  361 VGDWVYDRTL FQKIDCPYPC NPTCHHRVFT PLDAPPI

Type	Start	End	Confidence
Signal Peptide	1	22	0.85
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	397	0.98