YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|52353666
Protein type:	Globular with Signal Peptide
Type Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSPRLRRNP PPATAAAAAP APDQFRPGDL VEVLPDEPGY RGAHFPASVT ASHANPRGYT  60
   61 VAYDGSGCPL GEVVAASQLR PRPPDAPRGV PPAEHAVVDA FKGGAWWVGV ALGGGRAAAG 120
  121 GRVAVCFPET REVVEFDAAD VRPHLEWVAG EWLSPENMGI SKTMPYKKGT QVEVAKLEGN 180
  181 SVVAWFSAAV EKAIWKNSLL VDYNCSKNDG SVLPKEIVDL KHIRPHPQHA SAIIFCINDE 240
  241 VEGFQGNGWW LGVITDVHPE FRYTFKAAHS GKEIQLDQKA LRLRYDWTHD QWQQVTQMIP 300
  301 GLFYMLLPTF HNNVTKKFAK GSKVEVTSND DGFHGAWFQG TALKYVNNKI LVEYDALKAD 360
  361 DEITPLTEAI EVQHVRPCPP DIPVTSGFNL LDEVDACWND GWWVGVISKV NSGDRSSTEE 420
  421 TEFGHEQLRL HCDWVGGRWM RASLGLEA

Type	Start	End	Confidence
Signal Peptide	1	23	0.56
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	448	0.99