YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CYB5_ORYSJ
Protein type:	Transmembrane
Type Confidence:	0.89
Topology Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNDNKKVYT LEEVAKHNSK DDCWLIIGGK VYNVSKFLED HPGGDDVLLS STGKDATDDF  60
   61 EDVGHSTTAR AMMDEYYVGD IDTSTIPART KYVPPKQPHY NQDKTPEFII KILQFLVPLA 120
  121 ILGLAVAIRI YTKSESA

Type	Start	End	Confidence
Cytoplasmic	1	111	0.62
Transmembrane Helix	112	131	0.84
Non-Cytoplasmic	132	137	0.68