YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|222632297, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEHKEEESL VESVMDKISD KLHGRGGSSS SSSDSDGERT ADLKAKIYRL FGREKPVHSV  60
   61 LGGGKPADLF LWRNKKISVG VLAGATAIWL LFEVMDYHLL TLLCHCIILT LAMLFLWSNA 120
  121 STFINKSPPN IPEVKIPEDL AVNVARSLRF EINRGFATLR EIGQGHDLKK FLIVVVGLWV 180
  181 LSVLGSCCNF LTLFYIVFMV LYTVPVLYEK YEDQIDAFGE KAMIELKKYY AIFDEKCLSK 240
  241 IPKGPLKNKK H

Type	Start	End	Confidence
Cytoplasmic	1	73	0.97
Transmembrane Helix	74	92	0.87
Non-Cytoplasmic	93	98	0.74
Transmembrane Helix	99	118	0.95
Cytoplasmic	119	174	0.91
Transmembrane Helix	175	198	0.90
Non-Cytoplasmic	199	251	0.93