YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|51704045, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNGHLMLYSG VTLAFWATLI VVGTCYTIFD LGFRFDVAWF LTETSPYMWA NLGIGLAISL  60
   61 SVVGAAWGIY ITGSSILGGG VKAPRIKTKN LVSIIFCEAV AIYGIIMAIV ISNMAEQFKG 120
  121 TTPEAIGNRN YHAGFSMFGA GLTVGFSNLF CGICVGIVGS GAALADAQNP SLFVKILIVE 180
  181 IFGSAIGLFG VIVAILQTSK VKMGD

Type	Start	End	Confidence
Cytoplasmic	1	7	0.88
Transmembrane Helix	8	30	0.88
Non-Cytoplasmic	31	48	0.85
Transmembrane Helix	49	71	0.90
Cytoplasmic	72	90	0.81
Transmembrane Helix	91	111	0.95
Non-Cytoplasmic	112	139	0.83
Transmembrane Helix	140	164	0.86
Cytoplasmic	165	172	0.84
Transmembrane Helix	173	196	0.90
Non-Cytoplasmic	197	205	0.86