YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ERGI3_XENLA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METLHRLRQF DAYPKTLEDF RVKTCGGAVV TVISGLIMLI LFFSELQYYL TKEVYPELFV  60
   61 DKSRGDKLKI NIDVIFPHMP CAYLSIDAMD VAGEQQLDVE HNLFKQRLDL DKKPVTSEAD 120
  121 RHELGKSEEQ VVFDPKTLDP NRCESCYGAE TDDFSCCNSC DDVREAYRRK GWAFKTPDSI 180
  181 EQCKREGFSQ KMQEQKNEGC QVYGFLEVNK VAGNFHFAPG KSFQQSHVHV HAVEIHDLQS 240
  241 FGLDNINMTH EIKHLSFGKD YPGLVNPLDG TSIVAMQSSM MFQYFVKIVP TVYVKVDGEV 300
  301 LRTNQFSVTR HEKMTNGLIG DQGLPGVFVL YELSPMMVKF TEKHRSFTHF LTGVCAIIGG 360
  361 VFTVAGLIDS LIYYSTRAIQ KKIELGKAT

Type	Start	End	Confidence
Cytoplasmic	1	19	0.94
Transmembrane Helix	20	43	0.88
Non-Cytoplasmic	44	349	0.94
Transmembrane Helix	350	373	0.87
Cytoplasmic	374	389	0.82