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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50927247, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTAAITGTMN KKKKPFLGMA APLGYVPGLG RGATGFTTRS DIGPARDAND PVDDRHAPPG  60
   61 KRTVGDQMKK NQADDDDEDL NDTNYDEFNG YAGSLFSSGP YEKDDEEADA IYAALDKRMD 120
  121 ERRKERREQR EKEEIEKYRM ERPKIQQQFS DLKRKLAEVT EEEWLSIPEV GDARNKRQRN 180
  181 PRHEKLTPVP DSFFAKHLQT GENHTSVDPR QNQFGGLNTP FPGGLNSPYP GGMTPGLMTP 240
  241 GSGDLDMRKI GQARNTLMDM RLSQVSDSVS GQTVVDPKGY LTDLNSMIPT HGGDINDIKK 300
  301 ARLLLKSVRE TNPHHPPAWI ASARLEEVTG KLQVARNLIM KGTEMCPKSE DVWLEAARLQ 360
  361 PGDTAKAVVA QAVRHLPQSV RIYIRAAELE TDLRAKKRVL RKALEHVPNS VRLWKAAVEL 420
  421 EEPEDARIML SRAVECCPTN VELWLALARL ETYENARKVL NKARENIPTD RHIWITAAKL 480
  481 EEANGNTQMV EKIIDRAITS LRANGVEINR EQWIQDAEEC DKAGSVVTCQ AIIRDVIGIG 540
  541 IEEEDRKHTW MEDADSCVAH SALECARAIY AHSLQVFPSK KSVWLRAAYF EKNHGTRESL 600
  601 EALLQRAVAH CPKAEVLWLM GAKSKWLAGD VPAARSILAL AFQANPNSEE IWLAAVKLES 660
  661 ENNEYERARR LLAKARSSAP TARVFMKSVK LEWVLGNIEA AQDLCEEALR HYEDFPKLWM 720
  721 MKGQIEEQME QTEKARDAYN QGLKKCIHST SLWLLLSRLE EKVGQLTRAR AILEKSRLKN 780
  781 PKTPELWLES VRLEFRAGLK NIANTLMAKA LQECPNSGIL WAEAVFLEAR PQRKTKSVDA 840
  841 LKKCEHDPHV LLAVAKLFWS ERKITKAREW FHRTVKIDSD LGDAWATFYK FELQHGTEEQ 900
  901 QEEIRKRCEN AEPRHGELWC AVSKDIKNWQ QKIGEILVLA AAQIKNTF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle