YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FUD1B_XENLA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKKSTNIFT CSGAQHKWIQ VVNIDGNIFS IYVCFFVCFF FYLEPSSDDE SYEVLDLTEY  60
   61 ARRHHWWNRL FGRNSGPLTE KYSVATQIVI GGVSGWCAGF LFQKVGKLAA TAVGGGFLLL 120
  121 QIASHGGYIQ IDWKRVEKDV NKAKRKIKKE ANKTPEINTV IEKSTDFFKK NIVVSGGFVG 180
  181 GFLIGLAS

Type	Start	End	Confidence
Cytoplasmic	1	20	0.90
Transmembrane Helix	21	43	0.81
Non-Cytoplasmic	44	107	0.63
Transmembrane Helix	108	128	0.66
Cytoplasmic	129	166	0.69
Transmembrane Helix	167	187	0.48
Non-Cytoplasmic	188	188	0.62