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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|147902103, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATFDDLLQH IGEFDAFQRR IFILMCFISA MFTPIYMGIV FLGFVPDYRC ASAGIPELSN  60
   61 KCGWTLQEEL NYTVLEANGS TDSFYLSQCY QYDVDWNSTS PSCTNSPLNI TSQPPITRCK 120
  121 DGWVYNTTGS SIVTEFNLVC GDSWKLDLIQ SCVNLGFFIG GFISGYIADR FGRKPFLMTS 180
  181 LLITAIFGIL MAFSPNYPLI VIFRFIQGLV SKGCWLSGYI LVAEFVGLEH RRTVGILYQV 240
  241 AFTVGLLLLS GVAYVLPHWR WLQMTVTIPY FLFLAYYWCI PESPRWLITQ NRKAEAKVII 300
  301 HTIAKKNGKT VPDFLESLTA DEEVCEKQVP SFLDLVRTPQ IRKHTLILMY IWFTCAVVYQ 360
  361 GLIMHMGSTG DNIYLDFFIS ALVEFPSAII IIFTVDRVGR RWPWLVGCII TGVACLITTF 420
  421 IPHRLSWLIV TLSCVSRMGI TLSYEMVCLV NAELYPTFIR NLGIMVCSSL CDLGGVITPF 480
  481 IVYRLADIWQ DLPLTVFAVL ATVSGILVYF LPETRGRALP ETIEEAENLH KQVKTTKLAT 540
  541 TYSEVSKVDI 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle