YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|42561586, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.55
Topology Confidence:	0.49
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELRKRKIRA PLHIFVGITF FLLQLWSGTA QINHEDSSTK PSVKNSPSAT STRLLLSPPS  60
   61 FTGNRFSFRF RWRRIRRRNR VNRASREFLI AHNLVRARVG EPPFQWDGRL AAYARTWANQ 120
  121 RVGDCRLVHS NGPYGENIFW AGKNNWSPRD IVNVWADEDK FYDVKGNTCE PQHMCGHYTQ 180
  181 IVWRDSTKVG CASVDCSNGG VYAICVYNPP GNYEGENPFG SYDDQIGLAR DDPPAVIGGM 240
  241 A

Type	Start	End	Confidence
Cytoplasmic	1	9	0.53
Transmembrane Helix	10	31	0.49
Non-Cytoplasmic	32	241	0.75