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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|27380148, gi|...
Protein type: Transmembrane
Type Confidence: 0.72
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMAFAALYPS YKSPASALRR PFARGHPGER QISGEHEDLD ADHDQAAAVD SREHQLDHRH  60
   61 RHHGRQPHHR APGRCEPQPD GGDELDHGEV DGRGLPGHRL VLERLVLAAD EAGHLRPMIE 120
  121 ALEDREHRHH PQEQHEPARP DIVVGLRALR RDRRHRHCIV SGIVSGGVPG VGAVAGRIAG 180
  181 GDLGHGSLLA VSPRKINRLP SLAAGQAAVT GTMRAGIRII PAGGRVMAIK YGRPIELREV 240
  241 SRRDGAAASP ALDLAIRPRR NRKAEWARRM VRENVLTTDD LIWPLFLIDG NNKREQIASM 300
  301 PGVERLSVDQ AVREAERAMK LTIPCIALFP YTDPSLRDEE GSEACNPNNL VCQAVRAIKK 360
  361 EFPEIGVLCD VALDPFTSHG HDGLIADGAI LNDETVAVLV RQALVQAEAG CDIIAPSDMM 420
  421 DGRVAAIREG LDQAGLIDVQ IMAYAAKYAS AFYGPFRDAI GSAKTLTGDK RTYQMDSANT 480
  481 DEALREVELD ISEGADMVMV KPGMPYLDVV RRVKDTFAMP TFAYQVSGEY AMIAAAAGNG 540
  541 WLDGDRAMME SLLAFKRAGA DGVLSYFAPK AAEKLRTQG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle