YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|27352863, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYRKSIMKPQ AAVVALLALT AMPLARTEET AAMTGSSPVL TYEDVRKVAP ALEAYTQNRL  60
   61 LGDVWKRPGL APRDRSIVTL AALIARNQTI EMPYHFNLAL DNGVKPREIS EIITHLAFYA 120
  121 GWANAMSAVA VAEDVFAARD IGAAQLPVVS VTPLPLDEAA EAQRAAFVQD QFGASFPGVV 180
  181 QYTTDVLFRD LWLRPDLAPR DRSLVTVSAL IANGQMAQLT PHLNRAMDNG LTQTEASEAI 240
  241 TQLAFYVGWP NVFSAMPVAK DVFAKRPH

Type	Start	End	Confidence
Signal Peptide	1	27	0.99
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	268	0.99