YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|27352459, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.84
Topology Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTAPFDLDRF VQAQNPVYPT VTGELSRGRK QSHWMWFIFP QVAGLGFSAM TQRYAIGSRA  60
   61 EAEAYLAHPV LGPRLIACTR LVLAVQGRTI NAILGAPDDA KFRSSMTLFG AVSDDPIFSE 120
  121 ALARYFAGER DGATLEILAK LDQPSS

Type	Start	End	Confidence
Cytoplasmic	1	33	0.72
Transmembrane Helix	34	56	0.73
Non-Cytoplasmic	57	146	0.55