YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|27352305, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRIKPDVVI AEPFGQPHIA VWEGRPSYPP AYQPRGRPCL EWRVVMAWSI LFVAGLLEIT  60
   61 WAIGLKYTEG FTRLVPSVIT LAAMAGSVIL LGLALKSLPV GTAYAVWTGI GAVGTATLGI 120
  121 ILFGEPATAL RLASIGLIVA GIIGLKLVT

Type	Start	End	Confidence
Cytoplasmic	1	43	0.96
Transmembrane Helix	44	65	0.93
Non-Cytoplasmic	66	73	0.79
Transmembrane Helix	74	95	0.92
Cytoplasmic	96	102	0.81
Transmembrane Helix	103	123	0.94
Non-Cytoplasmic	124	128	0.78
Transmembrane Helix	129	148	0.93
Cytoplasmic	149	149	0.96