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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|27378891, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTERLNAFAV TLAQLNPTVG DVEGNAARAR AARVRAAADG ADLVLFPELF IAGYPPEDLV  60
   61 QKPAFQAACR AAIEGLARET ADGGPAMLVG TPWVEDGKLY NACALLDGGR IAGLRFKCNL 120
  121 PNYGVFDEKR LFARGPAAGP VTVRGVRIGV PICEDIWLDE SEDYENVVET LAETGAEIIL 180
  181 VPNGSPYARD KNDVRLSVAV ARVTESGLPL VYLNQVCGQD ELVFDGASFA LNGDLSLAAQ 240
  241 LPAFAESITT LRFTRNGEDW RCAGPIAAQP EGDHADYAAC VLGLRDYVAK NGFPGVLLGI 300
  301 SGGIDSALCA AIAVDALGAD QVHGVMLPYR YTAASSIADA GELAGHLGIR YEVLPIAEAV 360
  361 TGFETILSGI FKNLPPDITE ENLQARTRGT LLMAISNKTG LMVVTTGNKS EMSVGYATLY 420
  421 GDMNGGFNPI KDIYKTQVFR LAALRNSWRP EGGLGPAGEV IPPDIITRPP TAELRENQTD 480
  481 QDSLPTYDVL DAILERLVER EEPLDQIIAA GFDRETVTRI DHLLNVAEYK RRQAAPGVKV 540
  541 TPRNFGRDRR YPITNRFRDK GEPLPAPDDT LVSRDNGRSA DAFEG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle