YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|12620721
Protein type:	Transmembrane
Type Confidence:	0.54
Topology Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTERSTLSTV RCDYADAGGS RAVHLTFDDG PNPFCTPEVL DVLAQHRVPA TFFVIGTYAT  60
   61 EHPELIRRMI AEGHEVANHT MTHPDLSRCG PTELHDEVLT ASEAIRLACP LASPRHMRAP 120
  121 YGIWTRDVLA VAASAGLTAL HWSVDPRDWS RPGVDAIVNS VLANVRPGAI VLLHDGYPPD 180
  181 EEGLPSGSTL RDQTRTALAY LIPALQRRGF VIRPLPQLH

Type	Start	End	Confidence
Cytoplasmic	1	122	0.52
Transmembrane Helix	123	142	0.52
Non-Cytoplasmic	143	219	0.96