YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|27376552, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.40
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MILDLARLLL FPALMAFAAA SDLFTMTISN RVSLALVAGF FALALSGGMA PYEMLGHVGA  60
   61 GALVLVVAFT CFAMGWVGGG DAKVAASVAL WFGFAQLMNF LLYASLFGGA LTLLLLQFRQ 120
  121 WPLPYGLAGQ AWLARLHAKE SGIPYGIALA LSALMVYPET EWVKAIDLAH LALR

Type	Start	End	Confidence
Non-Cytoplasmic	1	5	0.40
Transmembrane Helix	6	26	0.79
Cytoplasmic	27	31	0.40
Transmembrane Helix	32	52	0.84
Non-Cytoplasmic	53	57	0.43
Transmembrane Helix	58	80	0.89
Cytoplasmic	81	91	0.47
Transmembrane Helix	92	118	0.78
Non-Cytoplasmic	119	140	0.49
Transmembrane Helix	141	158	0.64
Cytoplasmic	159	174	0.53