YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|27376551, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRMNRARIV VLTVAICAGG VAAYLASGSD NSAPPPAAPV AQLPTVDVLV AKNDIGLGQT  60
   61 VKPEDVQWQT WPAATASATF IRRNERPEGV TQVTGSIARA PFIQGEPIRD QKLVKAEGSG 120
  121 FMAAILPTGM RAISTEISPE TGAGGFILPN DRVDVLLTRR LKNPDPSNGA PDIVTSEIIL 180
  181 ANIRVLAIDQ APKEKDGQNT VVGKTVTLEL NPTQTATLSA ARQSGTLSLA LRSIVDVKMS 240
  241 EITLDDSAQR RDGVSIIRYG IPSSTAKAR

Type	Start	End	Confidence
Signal Peptide	1	23	0.95
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	269	0.99