YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|52138949, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLERVPNEE KLQLCRKYYM GGFALLPFLW LVNVVWFFKE AFFKPAYTEQ PLIQSYVKRS  60
   61 AFGLFVWVVI LTTWISVYQT HRASWGATGD YLSFTIPLGI P

Type	Start	End	Confidence
Cytoplasmic	1	17	0.86
Transmembrane Helix	18	38	0.92
Non-Cytoplasmic	39	58	0.81
Transmembrane Helix	59	78	0.91
Cytoplasmic	79	101	0.85