YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|50926967, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFRGLSSWLG LKQPEGAAAG EEPPSGDKLS SGAAPPEKSS EGLVEPTEEE EQLTEDPQFL  60
   61 HQAKGLGNYL YSFASAATKK ITESVTETAQ TIKKSVEEGK IDDILDKTII GDFQKEQKKF 120
  121 VEEQHTKKSE AAVPPWVESH DEETIQQQIL ALSADKRNFL RDPPAGVQFN FDFDQMYPVA 180
  181 LVMLQEDELL SKMRFALVPK LVKEEVFWRN YFYRISLIKQ SAQLTALAAQ QQASGKEEKS 240
  241 SSRDDNLPLT EAVRPKTPPV VIKSQLKNQE DEEEISTSPG VSEFVSDAFD ACNLNQEDLR 300
  301 KEMEQLVLDK KQEEATALEV CYRRFY

Type	Start	End	Confidence
Signal Peptide	1	19	0.73
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	326	0.99