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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SAC1_XENLA
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.47
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALAYENLKL HITPEKFYVE ACDPGVEDVL TIDRVSTEVT LSGKKDIPPS AITRAIYGIL  60
   61 GTIRLVAGMY LIVITRRKKV GDLLNHSIWK ATDFDIISYK KTMLHLTDSQ LQDNKAFLGM 120
  121 LSHVLSVDGF YFSVSYDLTH TLQRLANTSP EFQEMSLLER ADQRFVWNGN LLREFSAQPE 180
  181 IQKFAIPVVH GFIAIHSCSI NGKYFDWILI SRRSCFRAGV RYYVRGIDSE GHAANFVETE 240
  241 QIVHYNGNKA SFVQTRGSIP FYWSQRPNLK YKPKPQISKA VNHMDGFQRH FDSQVISYGK 300
  301 QVVLNLVNQK GSEKPLEQEF SQMVSGLGNG MVRYIAFDFH KECSRMRWDR LQILVEQVAE 360
  361 TQDEFGYFLV DTEGKVVSQQ DGIFRSNCMD CLDRTNVVQS LLARRSLQYQ LQRLGVLHVG 420
  421 QRIEEQIQFE KIYKNAWADN ANACAKQYAG TGALKTDFTR TGKRTQWGLL MDGWNSLIRY 480
  481 YKNNFSDGFR QDSIDLFLGN YSVEEAYSTS PLHIQTDWKF LALPIIMVVA FSMCIICLLM 540
  541 AGDTWTETLA YVLFWGTASI GTGAIIMYNG KDFVDAPKLV QKEKMD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle