YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	COQ2_MOUSE
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRWGGAGLA RGLRAVRSAW LRGPRGLPLA LVRSAGVPGA RDRRAPAPGT QRGRALSLSA  60
   61 AAVVNSAPRP LQPYLRLMRL DKPIGTWLLY LPCTWSIGLA ADPGCFPDWY MLSLFGTGAI 120
  121 LMRGAGCTIN DMWDRDFDKK VTRTANRPIA AGDISTFQSF VFLGGQLTLA LGVLLCLNYY 180
  181 SIAMGAASLL LVVTYPLMKR ITFWPQLALG LTFNWGALLG WSAVKGSCDP AVCLPLYFSG 240
  241 VMWTLIYDTI YAHQDKKDDA LIGLKSTALL FQENTRQWLS GFGVAMVAAL SLAGANSGQT 300
  301 VPYYAAVAAV GAHLAHQIYT VDIHRAEDCW DKFTSNRTVG MLLFLGIVLG NLCKEKTEEA 360
  361 KDAEAVRVGS EQTS

Type	Start	End	Confidence
Cytoplasmic	1	83	0.93
Transmembrane Helix	84	101	0.90
Non-Cytoplasmic	102	110	0.61
Transmembrane Helix	111	130	0.70
Cytoplasmic	131	148	0.65
Transmembrane Helix	149	174	0.66
Non-Cytoplasmic	175	175	0.44
Transmembrane Helix	176	195	0.83
Cytoplasmic	196	202	0.70
Transmembrane Helix	203	224	0.80
Non-Cytoplasmic	225	230	0.67
Transmembrane Helix	231	251	0.72
Cytoplasmic	252	274	0.83
Transmembrane Helix	275	295	0.80
Non-Cytoplasmic	296	300	0.64
Transmembrane Helix	301	320	0.52
Cytoplasmic	321	374	0.62