YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|17431843
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRWLPMLLFL AGWLALAQAA TVRVSAGQPL QAAIDAAHPG DMLEIEHATY TGNFVVNRAL  60
   61 TLRGLDRPTL SGGQRGDTVR VSAPDVVIEG LIVRDSGDSL KDQNAGINIL PGAHRAVVRH 120
  121 CDLTYNLFGL WIEKADDVRI EGNTITGKRD YNSAQRGNGV ELYNTQRARI LANNISFVRD 180
  181 ALYVDVSHHA VFKGNRLHHS RYGTHYMNSY YNLWEDNDSY DNRGGLALME VRDQIVRNNR 240
  241 TWGNADHGIM LRTLQDSRVE DNVVAGNDRG FFIYDVEYTQ LRGNLVIGNR VGVHLSAGST 300
  301 RNVVQGNDFI GNREPVRYVG ARDEAWGGRS PAERSQGNFW SNYLGWDRDG DGIGDLPYEA 360
  361 NNMVDRLIWR HPGVQLLLAS PAVQVLRLVS RQFPILRVPS VVDAYPRMQP IHPNWSTWRD 420
  421 KQP

Type	Start	End	Confidence
Signal Peptide	1	19	0.99
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	423	0.99