YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|17549343
Protein type:	Globular with Signal Peptide
Type Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLCNAASPL PFAASETPAA PGLDGKFRNA VSKPRQGFWQ GLGLMWTFFF KRPADTVPDR  60
   61 ALPTQPLTRD QLLQAPDRTL FRLGHSTVLL KLRGRFWLTD PVFSERASPV QWIGPKRFHA 120
  121 PPIALADLPD IEGVILSHDH YDHLDRDTVR ALAPRVKHFL TPLGVGDRLI DWGVAADKVR 180
  181 QLNWWQTTTV GGLQFTATPA QHFSGRTLSD GNRTLWASWV LIDDDLRLFF SGDTGYFPGF 240
  241 KAIGDRFGPF DLTLMETGAY DPRWSYVHML PEQTLQAHLD LRGRRLVPIH NGTFDLALHP 300
  301 WQEPFERILS AARAHDVEVV TPMIGAALDI VRPAATPAWW RPQPETPRGA VTPSLAAGHA 360
  361 GD

Type	Start	End	Confidence
Signal Peptide	1	19	0.55
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	362	0.99