YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|17431136
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPMVINSALY RNGRRERDLS VDAISDVLHA PGTFVWLGLH EPDDAMLARV QEEFHLHDLA  60
   61 IEDARKAHQR PKLETYGDTL FIVLNTAQME QGEVVFGETH LFVGRDFLVS VRHGPSTSYS 120
  121 PVRERCEHVP HLLAKGAPFA LYAVMDFVVD NYQPVLESME AAFDAIEGQL FGDAFDRAAI 180
  181 ERLYTLKRQL LRLRNAALPV EDIAGQLVRL HEDVVPKELR AYFRDVADHA HRLVGALDVI 240
  241 REMLTTAISV NVALVSVTQN DIVKRLAGWG AILAIPTVVF SNYGMNFKGM PELEHPAGYP 300
  301 IVLACTAAAC VWLYRKLRRS GWI

Type	Start	End	Confidence
Cytoplasmic	1	265	0.88
Transmembrane Helix	266	285	0.88
Non-Cytoplasmic	286	295	0.83
Transmembrane Helix	296	314	0.96
Cytoplasmic	315	323	0.87