YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|17429937
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEQTNVSSNV HADAHGHATG GAGHATVKGY LIGFVLAVIL TVIPFKMVMG GGFSHDTVLV  60
   61 TVMGLAVVQI VVHLIYFLHL DGSSAQRWNV MAFLFTLLIL VIVIVGSLWV MHNMNVNMMT 120
  121 H

Type	Start	End	Confidence
Cytoplasmic	1	26	0.77
Transmembrane Helix	27	48	0.88
Non-Cytoplasmic	49	56	0.65
Transmembrane Helix	57	80	0.89
Cytoplasmic	81	89	0.70
Transmembrane Helix	90	111	0.94
Non-Cytoplasmic	112	121	0.75