YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|17428891
Protein type:	Globular with Signal Peptide
Type Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSHSGFILTL SCPDQPGIVH AVSGLLFEQG CNILDSDQFG DEFTGRFFMR VHFVPQGQPL  60
   61 DLQALRERFA PIGERFSMQW GMFDAAVKPR VMILVSKIGH CLNDLLFRAR AGQLPIEIAA 120
  121 IVSNHRDFYQ LAASYDVPFL HLPLLKGTDA QKAQQEARIR EIIEEQRIDL VVLARYMQIL 180
  181 SDDLCRQLEG RAINIHHSFL PSFKGAKPYY QAHERGVKLI GATAHYVTAE LDEGPIIEQE 240
  241 IERVDHSMDP EQLTAVGRDV ECVALARAVK WHAEHRILLN GHKTVVFK

Type	Start	End	Confidence
Signal Peptide	1	21	0.87
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	288	0.99