YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|17427226
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIGSIFDQLW GARMKKRQLG RSGLQVSALG FGCMGMSFGY GPTALSRNEQ IAVIRAAYER  60
   61 GVTLFDTAEA YGPCVNEELV GEAVAPFRSR IVLATKFGFD IRDDRIVGLN SRPEHIRAVA 120
  121 EASLKRLRTD VIDLFYQHRV DPNVPIEEVA GALKDLVAEG KVRHFGLSEA GPRTIRRAHA 180
  181 VHPVSVLQTE YSLWTRDPEG GVLQTCEELG IGFVPWSPLG QGYLTGKVRA DTAFDATDLR 240
  241 STFPRFTPEA MQANQALLAG IRTIADRKGA TLAQIALAWL LAQKPWIVPI PGTRSAARLA 300
  301 ENLGAADVCL DAADLSEIDA ALANAPVGQP RLSDAHLRFI DP

Type	Start	End	Confidence
Cytoplasmic	1	20	0.94
Transmembrane Helix	21	41	0.93
Non-Cytoplasmic	42	342	0.99